CDS

Accession Number TCMCG051C23436
gbkey CDS
Protein Id XP_024461188.1
Location join(10325990..10326094,10326177..10326268,10326367..10326538,10326632..10326754,10327048..10327221,10327478..10327588,10327691..10327824,10327932..10328025,10328693..10328791,10328927..10329063,10329261..10329358,10329850..10329973,10330068..10330155,10330237..10330336,10330429..10330481,10331173..10331349,10331442..10331479,10332652..10332745,10333101..10333280,10333396..10333504,10333594..10333666,10333736..10333889,10334786..10334914,10335177..10335302,10335674..10335739,10335829..10336083)
Gene LOC7456272
GeneID 7456272
Organism Populus trichocarpa

Protein

Length 1034aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024605420.1
Definition RNA cytidine acetyltransferase 1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category H
Description RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14521        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0000154        [VIEW IN EMBL-EBI]
GO:0002097        [VIEW IN EMBL-EBI]
GO:0002101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008080        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016407        [VIEW IN EMBL-EBI]
GO:0016410        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016746        [VIEW IN EMBL-EBI]
GO:0016747        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051391        [VIEW IN EMBL-EBI]
GO:0051392        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1904812        [VIEW IN EMBL-EBI]
GO:1990882        [VIEW IN EMBL-EBI]
GO:1990883        [VIEW IN EMBL-EBI]
GO:1990884        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGAAGAAGGTGGACGAGAGAATCAGAACACTCATAGAAAATGGCGTCAAATTACGCCACCGTTCTCTCTTCCTTATCATCGGCGACAAGTCACGTGACCAGATTGTGAACCTTCATTATATGCTAAGCAAGGCAGTGGTGAAATCTAGACCGTCCGTTTTATGGTGCTACAAGGATAAACTTGAACTTAGCAGTCACAAGAAAAAAAGAGCAAAGCAGGTGAAAAAGTTAATGCAGAGAGGACTGTTGGATCCTGAGAAAGTTGATCCTTTTTCGCTCTTTCTTGAGACCGGAGGTTTGACATACTGTTTGTATAAGGATACTGAAAGAATTCTCGGTAATACTTTTGGAATGTGCATATTACAGGATTTTGAGGCTCTGACTCCAAATTTGTTGGCTAGAACGATAGAAACAGTTGAAGGTGGTGGATTGATTGTGTTGCTGCTACGCTCTTTATCTTCGTTGACCAGTTTGTACACAATGGTTATGGATGTTCATGAGAGGTTTCGTACCGAGTCCCATTCTGAGGCAACTGGGCGCTTTAATGAACGTTTCTTGTTATCACTTGCTTCGTGCAAAGCATGTGTGGTTATGGATGACGAGCTTAACATTTTACCTATTTCTTCTCATATAAGGTCAATCACCCCAAATCCTGTTAAAGAGGATTCTGAAGGGCTTTCAGAAGCGGAAAGAAACTTGAAGAATTTGAAAGAACAACTCCATGAGGATTTTCCTGTTGGTCCTTTGGTCAAAAAGTGCTGTACACTAGATCAGGGAAAAGCTGTGATCACATTTCTTGATTCAATTTTGGATAAGACGCCGCGCAGCACGGTTGCTTTGCTGGCTGCTCGAGGTCGTGGGAAATCTGCTGCCCTTGGTTTAGCAGTCGCTGGAGCTATTGCGGCTGGGTATTCAAATATATTTATTACTGCACCTAGCCCTGAAAACTTAAAGACTTTGTTTGAATTCATCTGCAAGGGATTCGATGCACTTGAATACAAGGAACATATTGATTATGATGTGGTGAAAAGTGCAAATCCTGAGTTCAAAAAAGCTACTGTGCGCATTAATATCTTCAAGCAGCACAGACAAACAATTCAGTATTTACAGCCACATGAACATGAAAAGCTCTCCCAAGTTGAACTGCTTGTTATTGATGAAGCTGCTGCAATTCCATTGCCTGTTGTGAGGTCCCTACTGGGTCCATATCTGGTTTTCCTTTCATCAACTGTGAATGGCTATGAAGGTACTGGCCGATCCTTGTCACTAAAACTTCTGCAGCAATTGGAAGAACAAAGCCAGATATCTTCTAAGAATGTGGAGGGCTCTCTTTCTGGTCGTCTTTTCAGAAAGATAGAATTAAGCGAGTCTATCAGATATGCTTCTCGTGATCCCATAGAATCCTGGCTCAATGCCTTACTCTGTCTCGATGTTGCGAATTCAATACCTAGTATCAGCAGATTACCCCTACCCAGTGAATGCGATCTCTATTATGTCAATCGGGACACTCTTTTTTCCTATCACAAAGACAGCGAGTTATTTCTGCAGCGAATGATGGCATTATATGTTGCGTCTCACTACAAAAACTCTCCTAATGACTTACAACTAATGGCCGATGCTCCAGCACATCATTTGTTCGTGTTGCTTGGCCCTGTTGATGAGTCAAAAAATCAACTTCCTGATATCTTATGCGTCATCCAGGTCTGTCTTGAAGGCCAGATTTCTCGTAAATCTGCAATCCAAAGCTTAAGTGAAGGTCATCAACCCTCTGGGGACCAAATACCATGGAAATTCTGTGAGCAGTTCCGTGATACAGTTTTCCCTAGCTTTTCAGGTGTTCGTATTGTACGCATTGCCACCCATCCAAGTGCAATGAGGCTTGGATACGGTTCTGCTGCAGTAGAACTCTTAACCAGGTACTTTGAAGGAAAAATAACTCCCATTTCTGAAGTAGATGATGAAAATGATGTGGAGATTCCTCGAGTTAGAGTTACCGAAGCTGCAGAGAAGGTTTCTTTGCTAGAAGAAAATATAAAACCTAGGACAGATCTTCCACATTTGCTAGTACATCTTCATGAACGGAAACCAGAAAAGCTCCATTACCTCGGTGTTTCCTTTGGGTTAACTTTGGACCTTCTTCGCTTTTGGAAGAGACGTAAATTTGCCCCCTTCTACATCGGCCAAATTCCAAATACTGTAACTGGTGAGCATTCATGTATGGTCCTCAAACCATTAAACAGTGATGATAGTGAAGTTAGTGGGTCAGATGAATGGGGCTTTTTTGGTCCATTTTACCAAGATTTCAAGCGAAGGTTTGCTAGGCTACTGGAAGGTGACGGTTTCCGTTCAATGGAATATAAGCTTGCTATGAGTGTCTTGGATCCTAAGATTAATTACGCTGACATGGAGCAAGAACCCATGCCATCTGCCCCTGATGGATTTTGGAGGTCACTTACTGATGATCTATCACTATATGATTTGGAAAGGTTGAAAGTTTATACTGAAAACCTAGCTGATTTTCATTTGATTTTAGACATTGTTCCAATCCTGGCTCGTCTATATTTTCGAGGAAAGCTTCCCATATCATTGTCATATGTTCAGGCTTCTGTTTTACTCTGTGTTGGTTTGCAGCAACGAAATATTACCTTTATTGAGGAACAAATGAAGTTGGAAAGAACACAAATTTTGTCACTTTTTATGAAGGTTATGAAGAAGTTCTACAAATATCTTCATGGTATTGCATCAAAAGATGTAGAATCAACCCTACCCAGGTTAAAAGAGAGGGAGCTGAGACCTCACAGCATATCGGTGGATGATGATCTAAAGGAAGCAGCAAAGCAAGTTGAGGATGGGATGAAATCCAAGATGGAGGGTTTGCTGAGTCCTGAATTCCTTCAACAGTACGCAATTGAGGGGGAAAAAGAAGAGTTCGACGATGCTTTGCAAAAACACGGTGGAAAGATAAACCCAGGTAGTGTTATTAGTGTAAAATCCAATAGAGTTAAACCAGAGAAACATGGAAAGCAAGAGAGTAGTAGGAGTGGGAAAAAGCGAGGTAAGGAAGACCGCGGCTCTAAATCAAATAAAAAGAGTAAATCTTAA
Protein:  
MRKKVDERIRTLIENGVKLRHRSLFLIIGDKSRDQIVNLHYMLSKAVVKSRPSVLWCYKDKLELSSHKKKRAKQVKKLMQRGLLDPEKVDPFSLFLETGGLTYCLYKDTERILGNTFGMCILQDFEALTPNLLARTIETVEGGGLIVLLLRSLSSLTSLYTMVMDVHERFRTESHSEATGRFNERFLLSLASCKACVVMDDELNILPISSHIRSITPNPVKEDSEGLSEAERNLKNLKEQLHEDFPVGPLVKKCCTLDQGKAVITFLDSILDKTPRSTVALLAARGRGKSAALGLAVAGAIAAGYSNIFITAPSPENLKTLFEFICKGFDALEYKEHIDYDVVKSANPEFKKATVRINIFKQHRQTIQYLQPHEHEKLSQVELLVIDEAAAIPLPVVRSLLGPYLVFLSSTVNGYEGTGRSLSLKLLQQLEEQSQISSKNVEGSLSGRLFRKIELSESIRYASRDPIESWLNALLCLDVANSIPSISRLPLPSECDLYYVNRDTLFSYHKDSELFLQRMMALYVASHYKNSPNDLQLMADAPAHHLFVLLGPVDESKNQLPDILCVIQVCLEGQISRKSAIQSLSEGHQPSGDQIPWKFCEQFRDTVFPSFSGVRIVRIATHPSAMRLGYGSAAVELLTRYFEGKITPISEVDDENDVEIPRVRVTEAAEKVSLLEENIKPRTDLPHLLVHLHERKPEKLHYLGVSFGLTLDLLRFWKRRKFAPFYIGQIPNTVTGEHSCMVLKPLNSDDSEVSGSDEWGFFGPFYQDFKRRFARLLEGDGFRSMEYKLAMSVLDPKINYADMEQEPMPSAPDGFWRSLTDDLSLYDLERLKVYTENLADFHLILDIVPILARLYFRGKLPISLSYVQASVLLCVGLQQRNITFIEEQMKLERTQILSLFMKVMKKFYKYLHGIASKDVESTLPRLKERELRPHSISVDDDLKEAAKQVEDGMKSKMEGLLSPEFLQQYAIEGEKEEFDDALQKHGGKINPGSVISVKSNRVKPEKHGKQESSRSGKKRGKEDRGSKSNKKSKS